Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
smarca5SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5. (1090 aa)    
Predicted Functional Partners:
baz1b
Tyrosine-protein kinase BAZ1B isoform X1.
   
 0.980
baz1a
Bromodomain adjacent to zinc finger domain protein 1A isoform X5.
   
 0.958
pole3
DNA polymerase epsilon subunit 3.
    
 0.947
LOC108277234
Remodeling and spacing factor 1-like isoform X1.
   
 0.941
RSF1
Remodeling and spacing factor 1 isoform X1.
   
 0.941
LOC108268950
Cat eye syndrome critical region protein 2.
   
 0.934
chrac1
Chromatin accessibility complex protein 1.
   
 0.924
rbbp7
Histone-binding protein RBBP7 isoform X1.
   
 0.885
rbbp4
Histone-binding protein RBBP4.
   
 0.885
LOC108279852
LOW QUALITY PROTEIN: nucleosome-remodeling factor subunit BPTF-like.
   
 0.884
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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