Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
triap1TP53-regulated inhibitor of apoptosis 1. (74 aa)    
Predicted Functional Partners:
prelid1
PRELI domain-containing protein 1, mitochondrial.
    
 0.987
LOC108275727
PRELI domain-containing protein 1, mitochondrial-like.
    
 0.981
prelid3a
PRELI domain containing protein 3A.
    
 0.939
prelid3b
Protein slowmo homolog 2.
    
 0.939
pum1
Pumilio homolog 1 isoform X1.
    
   0.806
stard7
stAR-related lipid transfer protein 7, mitochondrial.
     
 0.760
phb
Prohibitin.
   
 
 0.672
gramd1c
GRAM domain-containing protein 1C isoform X1.
      
 0.622
crls1
Cardiolipin synthase (CMP-forming).
    
 
 0.577
pisd
Phosphatidylserine decarboxylase proenzyme, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine.
      
 0.571
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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