Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pcyox1lPrenylcysteine oxidase-like. (504 aa)    
Predicted Functional Partners:
fam136a
Protein FAM136A isoform X1.
      
 0.672
ggcx
Vitamin K-dependent gamma-carboxylase.
   
  
 0.635
gmcl1
Germ cell-less protein-like 1.
      
 0.629
foxred2
FAD-dependent oxidoreductase domain-containing protein 2 isoform X1.
      
 0.615
pgk1
Phosphoglycerate kinase.
      
 0.615
nenf
Neudesin; Belongs to the cytochrome b5 family.
      
 0.615
erp27
Endoplasmic reticulum resident protein 27.
   
  
 0.576
pyurf
Protein preY, mitochondrial.
      
 0.560
cnpy3
Protein canopy homolog 3.
      
 0.555
slc35e4
Solute carrier family 35 member E4 isoform X2.
      
 0.532
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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