Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pex11gPeroxisomal membrane protein 11C isoform X1. (237 aa)    
Predicted Functional Partners:
pex11a
Peroxisomal membrane protein 11A isoform X1.
    
0.958
pex11b
Peroxisomal membrane protein 11B isoform X2.
    
 0.958
pex13
Peroxisome biogenesis factor 13.
   
 0.953
pex19
Peroxisomal biogenesis factor 19.
   
 0.952
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 0.942
pex14
Peroxisomal membrane protein PEX14.
    
 0.898
slc25a17
Peroxisomal membrane protein PMP34 isoform X1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.897
pex3
Peroxisomal biogenesis factor 3.
   
 0.869
fam185a
Protein FAM185A.
    
 0.839
sdr42e1
Short-chain dehydrogenase/reductase family 42E member 1; Belongs to the 3-beta-HSD family.
   
  
 0.813
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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