Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
LOC108272558Uncharacterized protein LOC108272558. (217 aa)    
Predicted Functional Partners:
LOC108257237
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
 0.980
LOC108276623
Neuropeptide FF receptor 1-like isoform X1; Belongs to the G-protein coupled receptor 1 family.
     
 0.974
LOC108255451
Neuropeptide FF receptor 1-like; Belongs to the G-protein coupled receptor 1 family.
     
 0.974
npff
pro-FMRFamide-related neuropeptide FF.
     
 0.973
LOC108278689
Cytochrome b-c1 complex subunit 9.
   
 0.972
LOC108268827
Cytochrome b-c1 complex subunit 8.
   
 0.969
LOC108276631
Neuropeptide FF receptor 1-like isoform X2; Belongs to the G-protein coupled receptor 1 family.
     
 0.968
LOC108259670
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.954
UQCRFS1
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.954
LOC108259755
Neuropeptide FF receptor 2-like; Belongs to the G-protein coupled receptor 1 family.
     
 0.937
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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