STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108278067Gamma-interferon-inducible lysosomal thiol reductase-like isoform X2. (236 aa)    
Predicted Functional Partners:
wdr90
WD repeat-containing protein 90.
    
   0.562
c5h1orf194
Uncharacterized protein C1orf194 homolog.
   
   0.461
pacrg
Parkin coregulated gene protein.
    
   0.456
c21h1orf158
Uncharacterized protein C1orf158 homolog isoform X1.
    
   0.456
c4h15orf65
Uncharacterized protein C15orf65 homolog.
    
   0.456
c22h9orf135
Uncharacterized protein C9orf135 homolog.
    
   0.456
spag8
Sperm-associated antigen 8.
    
   0.456
efhb
EF-hand domain-containing family member B.
    
   0.456
LOC108280720
Mitochondrial fission factor homolog A-like isoform X3.
    
 
 0.447
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.