STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc51Coiled-coil domain-containing protein 51. (416 aa)    
Predicted Functional Partners:
ENSIPUP00000035882
annotation not available
      
 0.645
ift140
LOW QUALITY PROTEIN: intraflagellar transport protein 140 homolog.
      
 0.578
LOC108273815
Rho GTPase-activating protein 23-like isoform X1.
      
 0.452
LOC108276663
Rho GTPase-activating protein 23-like isoform X3.
      
 0.452
adamts18
A disintegrin and metalloproteinase with thrombospondin motifs 18 isoform X1.
      
 0.451
abcb8
ATP-binding cassette sub-family B member 8, mitochondrial isoform X1.
    
 
 0.438
abcb10
ATP-binding cassette sub-family B member 10, mitochondrial isoform X1.
    
 
 0.438
LOC108268326
Uncharacterized protein LOC108268326.
      
 0.408
LOC108270139
Transcriptional-regulating factor 1-like isoform X1.
      
 0.408
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.