STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bcorBCL-6 corepressor isoform X1. (1666 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.698
bcl6
B-cell lymphoma 6 protein isoform X1.
    
 0.691
LOC108267673
B-cell CLL/lymphoma 6 member B protein-like.
    
 0.673
LOC108268038
B-cell lymphoma 6 protein-like.
    
 0.673
pcgf1
Polycomb group RING finger protein 1 isoform X1.
    
 0.664
pcgf6
Polycomb group RING finger protein 6 isoform X1.
    
 0.664
rnf2
E3 ubiquitin-protein ligase RING2.
    
 0.660
mllt1
Protein ENL isoform X1.
    
 
 0.603
LOC108278144
Protein ENL-like.
    
 
 0.603
mllt3
Protein AF-9 isoform X2.
    
 
 0.603
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.