STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108275563Hormonally up-regulated neu tumor-associated kinase homolog A-like isoform X1. (736 aa)    
Predicted Functional Partners:
aakb1
5'-AMP-activated protein kinase subunit beta-1 isoform X1.
    
 0.583
PRKAB2
5'-AMP-activated protein kinase subunit beta-2-like.
    
 0.583
prkab1
5'-AMP-activated protein kinase subunit beta-1.
    
 0.583
rptor
Regulatory-associated protein of mTOR isoform X1.
    
 0.530
LOC108256599
5'-AMP-activated protein kinase subunit gamma-1-like isoform X1.
   
 0.494
LOC108258362
5'-AMP-activated protein kinase subunit gamma-1-like isoform X2.
   
 0.494
LOC108266105
5'-AMP-activated protein kinase subunit gamma-1-like isoform X3.
   
 0.494
LOC108267467
5'-AMP-activated protein kinase subunit gamma-1-like isoform X3.
   
 0.494
prkag1
5'-AMP-activated protein kinase subunit gamma-1.
   
 0.494
tsc2
Tuberin isoform X1.
    
 0.461
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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