STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttc7aTetratricopeptide repeat protein 7A. (849 aa)    
Predicted Functional Partners:
pi4ka
Phosphatidylinositol 4-kinase alpha isoform X3; Belongs to the PI3/PI4-kinase family.
    
 
 0.923
fam126a
Hyccin.
    
 
 0.836
efr3b
Protein EFR3 homolog B isoform X1.
   
 
 0.801
efr3a
Protein EFR3 homolog A isoform X4.
   
 
 0.781
fam126b
Protein FAM126B isoform X1.
    
 
 0.610
LOC108271325
Protein FAM126B-like isoform X2.
    
 
 0.590
pi4kb
Phosphatidylinositol 4-kinase beta isoform X1; Belongs to the PI3/PI4-kinase family.
      
 0.497
pcmt1
Protein-L-isoaspartate O-methyltransferase.
      
 0.493
ostm1
Osteopetrosis-associated Transmembrane protein 1.
      
 0.467
LOC108260264
Transmembrane protein 150A-like.
      
 0.456
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.