STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ulk4Serine/threonine-protein kinase ULK4 isoform X2. (1293 aa)    
Predicted Functional Partners:
sufu
Suppressor of fused homolog.
    
 0.855
kif7
Kinesin-like protein KIF7 isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.585
jhy
Uncharacterized protein C11orf63 homolog isoform X3.
      
 0.554
CHRNA9
Neuronal acetylcholine receptor subunit alpha-9-II-like.
      
 0.542
chrna9
Neuronal acetylcholine receptor subunit alpha-9.
      
 0.542
kif21b
Kinesin-like protein KIF21B isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.540
gkap1
G kinase-anchoring protein 1 isoform X1.
   
 0.522
tp53rk
TP53-regulating kinase.
      
 0.504
LOC108269025
Proton-coupled amino acid transporter 1-like isoform X1.
      
 0.499
LOC108269459
Coiled-coil domain-containing protein 78-like.
   
 0.490
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.