STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cd2bp2CD2 antigen cytoplasmic tail-binding protein 2 isoform X1. (379 aa)    
Predicted Functional Partners:
ddx23
Putative ATP-dependent RNA helicase DDX23.
   
 
 0.946
prpf8
pre-mRNA-processing-splicing factor 8.
    
 
 0.921
prpf6
pre-mRNA-processing factor 6.
   
 
 0.920
txnl4a
Thioredoxin-like protein 4A.
    
 
 0.918
eftud2
116 kDa U5 small nuclear ribonucleoprotein component.
    
 
 0.911
txnl4b
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
    
 0.899
sart1
U4/U6.U5 tri-snRNP-associated protein 1 isoform X1.
   
 
 0.896
aar2
Protein AAR2 homolog.
   
 
 0.878
tssc4
Protein TSSC4.
    
 
 0.858
LOC108272150
Small nuclear ribonucleoprotein-associated protein.
    
 
 0.840
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.