STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atripATR-interacting protein. (754 aa)    
Predicted Functional Partners:
atr
Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family.
    
 0.998
fancm
Fanconi anemia group M protein.
     
 0.996
slf1
SMC5-SMC6 complex localization factor protein 1 isoform X1.
    
 0.977
fanci
Fanconi anemia group I protein.
     
 0.975
wrn
Werner syndrome ATP-dependent helicase isoform X1.
     
 0.973
rpa1
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
    
 0.969
fancg
Fanconi anemia group G protein isoform X1.
   
 
 0.966
topbp1
DNA topoisomerase 2-binding protein 1 isoform X7.
    
 0.942
atm
Non-specific serine/threonine protein kinase.
    
 0.884
brca1
Breast cancer type 1 susceptibility protein isoform X2.
    
 0.876
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.