STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108267465Histone-lysine N-methyltransferase 2C-like isoform X3. (119 aa)    
Predicted Functional Partners:
ash2l
set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X1.
    
 0.894
rbbp5
Retinoblastoma-binding protein 5 isoform X1.
    
 0.891
kmt2c
Histone-lysine N-methyltransferase 2C isoform X11.
 
   
  0.854
ENSIPUP00000012077
annotation not available
 
      0.854
wdr5
WD repeat-containing protein 5.
   
 0.799
wsb1
WD repeat and SOCS box-containing protein 1.
   
 0.687
wsb2
WD repeat and SOCS box-containing protein 2.
   
 0.687
cenpn
Centromere protein N isoform X1.
   
 0.665
kdm6a
Lysine-specific demethylase 6A isoform X1.
   
 0.663
LOC108272609
Histone demethylase UTY-like isoform X1.
   
 0.662
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.