STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
olig2Oligodendrocyte transcription factor 2. (278 aa)    
Predicted Functional Partners:
nkx2-2
Homeobox protein Nkx-2.2a.
   
 0.678
sox10
Transcription factor SOX-10.
   
 0.651
id4
DNA-binding protein inhibitor ID-4.
    
 
 0.592
gfap
Glial fibrillary acidic protein; Belongs to the intermediate filament family.
   
  
 0.572
nkx6-1
Homeobox protein Nkx-6.1.
   
  
 0.543
shh
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
      
 0.506
gart
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
   
  
 0.459
cnp
2',3'-cyclic-nucleotide 3'-phosphodiesterase.
      
 0.450
SOX2
Transcription factor SOX-2.
   
 0.450
ets1
Protein C-ets-1 isoform X1.
   
  
 0.434
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.