STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ahcyl2Adenosylhomocysteinase. (594 aa)    
Predicted Functional Partners:
LOC108266313
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 0.967
cbs
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 0.967
mtr
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.956
LOC108271828
Homocysteine S-methyltransferase YbgG-like; Involved in the regulation of homocysteine metabolism.
  
 
 0.955
LOC108279028
Betaine--homocysteine S-methyltransferase 1; Involved in the regulation of homocysteine metabolism.
  
 
 0.955
cth
Cystathionine gamma-lyase.
  
 0.954
LOC108260319
Kynurenine--oxoglutarate transaminase 1-like isoform X2.
   
 0.914
LOC108260321
Kynurenine--oxoglutarate transaminase 1-like isoform X1.
   
 0.914
LOC108260322
Kynurenine--oxoglutarate transaminase 1-like.
   
 0.914
kyat3
Kynurenine--oxoglutarate transaminase 3 isoform X1.
   
 0.914
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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