STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108268345Interferon-induced protein 44-like. (443 aa)    
Predicted Functional Partners:
rsad2
Radical S-adenosyl methionine domain-containing protein 2.
   
  
 0.911
usp18
Ubl carboxyl-terminal hydrolase 18; Belongs to the peptidase C19 family.
   
  
 0.881
xaf1
XIAP-associated factor 1 isoform X1.
   
 0.857
ifih1
Interferon-induced helicase C domain-containing protein 1.
   
  
 0.832
eif2ak2
Interferon-induced, double-stranded RNA-activated protein kinase isoform X2.
   
  
 0.814
ddx58
Probable ATP-dependent RNA helicase DDX58.
   
  
 0.798
ifi35
Interferon-induced 35 kDa protein.
   
  
 0.715
epsti1
Epithelial-stromal interaction protein 1 isoform X2.
   
  
 0.715
LOC108270925
Receptor-transporting protein 3-like isoform X2.
   
  
 0.603
irf9
Interferon regulatory factor 9.
   
 
 0.568
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.