STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSIPUP00000021564annotation not available (158 aa)    
Predicted Functional Partners:
lss
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 0.703
sqle
Squalene monooxygenase.
  
 0.700
aasdh
acyl-CoA synthetase family member 4 isoform X1.
  
 0.661
LOC108275150
Phosphoethanolamine N-methyltransferase 3-like isoform X1.
   
 0.659
hsd17b7
3-keto-steroid reductase.
    
 
 0.625
LOC108258762
Cytochrome P450 3A30-like isoform X1.
  
 0.617
LOC108258760
Cytochrome P450 3A30-like.
  
 0.616
LOC108258764
Cytochrome P450 3A27-like.
  
 0.616
LOC108258748
Cytochrome P450 3A30-like.
  
 0.614
LOC108262960
Cytochrome P450 2U1; Belongs to the cytochrome P450 family.
  
 0.608
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.