STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctL-dopachrome tautomerase. (516 aa)    
Predicted Functional Partners:
LOC108260967
5,6-dihydroxyindole-2-carboxylic acid oxidase-like.
  
  
0.905
RAB38
Ras-related protein Rab-38-like isoform X1.
   
  
 0.668
LOC108274278
GTP cyclohydrolase 1-like.
   
 
 0.646
mitf
Microphthalmia-associated transcription factor isoform X1.
   
 0.632
slc24a5
Sodium/potassium/calcium exchanger 5; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.609
grm5
Metabotropic glutamate receptor 5.
    
 
 0.605
pmel
Melanocyte protein PMEL isoform X2.
   
  
 0.596
slc7a11
Cystine/glutamate transporter.
    
 0.588
sox10
Transcription factor SOX-10.
    
 0.565
hmgb2
High mobility group protein B2.
    
 0.546
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.