STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108280419Tissue factor-like. (250 aa)    
Predicted Functional Partners:
LOC108258589
Coagulation factor VII-like.
    
 0.818
LOC108258590
Coagulation factor VII-like.
    
 0.722
f9
Coagulation factor IX isoform X1.
    
 0.682
LOC108266850
Tissue factor pathway inhibitor.
     
 0.679
LOC108268424
Coagulation factor IX-like isoform X2.
    
 0.672
LOC108277713
Coagulation factor X-like.
    
 0.668
LOC108275052
Venom prothrombin activator vestarin-D1-like; Belongs to the peptidase S1 family.
    
 0.668
LOC108258588
Coagulation factor X-like.
    
 0.668
fa7
Coagulation factor VII precursor.
    
 0.668
f2
Prothrombin; Belongs to the peptidase S1 family.
    
 0.660
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.