STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cwf19l1CWF19-like protein 1. (568 aa)    
Predicted Functional Partners:
cdc5l
Cell division cycle 5-like protein isoform X1.
   
 
 0.955
dbr1
Lariat debranching enzyme.
   
 
0.803
snrpa1
U2 small nuclear ribonucleoprotein A.
    
   0.557
prpf19
pre-mRNA-processing factor 19.
   
 
 0.523
slc25a19
Mitochondrial Thiamine pyrophosphate carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.468
c11h1orf74
UPF0739 protein C1orf74 homolog isoform X1.
      
 0.465
cwf19l2
CWF19-like protein 2.
    
 
0.455
syf2
Pre-mRNA-splicing factor SYF2.
    
   0.446
xab2
Pre-mRNA-splicing factor SYF1.
    
 
 0.430
dhx36
ATP-dependent RNA helicase DHX36.
   
  
 0.409
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.