STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tspan6Tetraspanin. (251 aa)    
Predicted Functional Partners:
pick1
PRKCA-binding protein.
     
 0.695
tspan31
Tetraspanin-31; Belongs to the tetraspanin (TM4SF) family.
   
  
 0.671
sdcb1
Syntenin-1.
    
 0.464
sdcbp
Syntenin-1.
    
 0.464
LOC108279029
Lymphocyte cytosolic protein 2-like.
   
  
 0.453
grip2
Glutamate receptor-interacting protein 2 isoform X2.
    
 0.409
ENSIPUP00000019800
Glutamate receptor-interacting protein 2-like.
    
 0.409
LOC108273196
Uncharacterized protein LOC108273196 isoform X2.
      
 0.402
sh2d7
SH2 domain-containing protein 7 isoform X1.
      
 0.402
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.