STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
itga2Integrin alpha-2 isoform X1; Belongs to the integrin alpha chain family. (1104 aa)    
Predicted Functional Partners:
itgb1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.951
itgb1-2
Integrin beta; Belongs to the integrin beta chain family.
   
 0.951
chad
Chondroadherin.
   
 
 0.906
tln1
Talin-1 isoform X2.
    
 0.802
LOC108265409
Uncharacterized protein LOC108265409.
    
 0.800
tnr
tenascin-R.
    
 0.799
tnn
tenascin-N isoform X1.
   
 0.792
tnc
Tenascin isoform X1.
    
 0.781
col6a1
Collagen alpha-1(VI) chain.
   
 
 0.779
lama1
Laminin subunit alpha-1.
    
 0.752
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.