STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108276046Tumor necrosis factor receptor superfamily member 9-like. (291 aa)    
Predicted Functional Partners:
LOC108254817
Tumor necrosis factor receptor superfamily member 16-like isoform X1.
  
  
 
0.906
LOC108255825
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 
 0.494
LOC108264960
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 
 0.494
traf2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 
 0.494
cd247
T-cell surface glycoprotein CD3 zeta chain precursor.
      
 0.438
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.