STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pak2Non-specific serine/threonine protein kinase. (531 aa)    
Predicted Functional Partners:
pak1
Non-specific serine/threonine protein kinase.
  
 
0.962
cdc42
Cell division control protein 42-like protein.
   
 0.947
LOC108276251
Cell division control protein 42 homolog.
   
 0.947
itsn2
LOW QUALITY PROTEIN: intersectin-2.
    
 0.943
ENSIPUP00000019729
annotation not available
    
 0.943
LOC108269989
Intersectin-2-like isoform X1.
    
 0.943
raf1
RAF proto-oncogene serine/threonine-protein kinase isoform X2.
    
0.937
LOC108256334
Mitogen-activated protein kinase kinase kinase 3-like.
    
0.937
map3k3
Mitogen-activated protein kinase kinase kinase 3.
    
0.937
LOC108276324
RAF proto-oncogene serine/threonine-protein kinase-like.
    
0.937
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.