STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113590411Ryanodine receptor 2b (cardiac). (4787 aa)    
Predicted Functional Partners:
LOC113591840
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
   
 0.961
LOC113591278
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.930
LOC113587857
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.929
prkacb
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.929
LOC113582234
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.903
LOC113589230
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.903
ENSEEEP00000003861
B30.2/SPRY domain-containing protein.
  
  
 
0.902
LOC113590057
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.902
PPP1CA
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.902
LOC113576883
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.902
Your Current Organism:
Electrophorus electricus
NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.