STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
agbl4ATP/GTP binding protein-like 4. (487 aa)    
Predicted Functional Partners:
LOC113582295
Uncharacterized protein.
      
 0.491
LOC113573566
Uncharacterized protein.
      
 0.491
ttll12
Tubulin tyrosine ligase-like family, member 12.
      
 0.442
kif18a
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.442
rabac1
PRA1 family protein.
      
 0.434
Ttll5
Uncharacterized protein.
      
 0.432
ENSEEEP00000043961
Uncharacterized protein.
      
 0.432
syt17
Synaptotagmin XVII.
      
 0.404
itfg1
Integrin alpha FG-GAP repeat containing 1.
      
 0.402
lpcat3
Lysophosphatidylcholine acyltransferase 3; Belongs to the membrane-bound acyltransferase family.
      
 0.400
Your Current Organism:
Electrophorus electricus
NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish
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