STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113578819Uncharacterized protein. (638 aa)    
Predicted Functional Partners:
smc3
Structural maintenance of chromosomes protein.
   
 0.989
smc1a
Structural maintenance of chromosomes protein.
   
 0.976
LOC113589241
Structural maintenance of chromosomes protein.
   
 0.970
STAG1
Stromal antigen 1a.
   
 0.956
LOC113576129
Stromal antigen 1b.
   
 0.956
stag2
Stromal antigen 2b.
   
 0.954
LOC113592272
SCD domain-containing protein.
   
 0.953
ENSEEEP00000048549
Stromal antigen 3.
   
 0.953
ENSEEEP00000047995
Uncharacterized protein.
   
 0.923
ENSEEEP00000004640
Rad21_Rec8_N domain-containing protein.
  
  
 
0.901
Your Current Organism:
Electrophorus electricus
NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish
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