STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc38a7Aa_trans domain-containing protein. (464 aa)    
Predicted Functional Partners:
LOC113574170
Ras related GTP binding A.
   
 0.630
lamtor1
Uncharacterized protein.
    
 0.625
gad2
Glutamate decarboxylase 2.
     
 0.620
lamtor2
Robl_LC7 domain-containing protein.
    
 0.615
LOC113574359
Protein YIPF.
      
 0.590
lamtor5
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.
    
 0.581
pnpo
Uncharacterized protein.
      
 0.580
lamtor4
Uncharacterized protein.
    
 0.575
slc38a9
Solute carrier family 38, member 9.
      
0.559
yipf3
Yip1 domain family, member 3.
      
 0.558
Your Current Organism:
Electrophorus electricus
NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.