STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113575425Zinc finger, FYVE domain containing 9b. (644 aa)    
Predicted Functional Partners:
ENSEEEP00000001488
Mothers against decapentaplegic homolog.
    
 0.603
LOC113567946
Mothers against decapentaplegic homolog.
    
 0.603
smad4
Mothers against decapentaplegic homolog.
    
 0.603
LOC113571196
Mothers against decapentaplegic homolog.
    
 0.603
smad9
Mothers against decapentaplegic homolog.
   
 0.596
LOC113568364
SMAD family member 1.
   
 0.596
ENSEEEP00000016876
Uncharacterized protein.
   
 0.596
LOC113585069
Mothers against decapentaplegic homolog.
   
 0.596
smad5
Uncharacterized protein.
   
 0.596
smad2
Mothers against decapentaplegic homolog.
   
 0.596
Your Current Organism:
Electrophorus electricus
NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.