STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113591154POU domain protein. (377 aa)    
Predicted Functional Partners:
LOC113571278
Uncharacterized protein.
     
 0.484
pcf11
PCF11, cleavage and polyadenylation factor subunit.
     
 0.450
snapc4
Small nuclear RNA activating complex, polypeptide 4.
    
  0.448
gtf2b
TFIIB-type domain-containing protein.
    
 0.426
snapc3
Uncharacterized protein.
   
 
  0.406
gtf2e1
HTH TFE/IIEalpha-type domain-containing protein.
    
  0.405
Your Current Organism:
Electrophorus electricus
NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.