STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mib1Mindbomb E3 ubiquitin protein ligase 1. (1030 aa)    
Predicted Functional Partners:
dll1
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
   
 0.666
zmym4
Si:ch211-173p18.3.
   
  0.598
LOC113579630
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
   
 0.590
trip11
Thyroid hormone receptor interactor 11.
    
 0.589
dll3
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
   
 0.588
pcm1
Pericentriolar material 1.
    
 0.575
neurl1b
Uncharacterized protein.
    
 0.522
neurl1
Neuralized E3 ubiquitin protein ligase 1Aa.
    
 0.522
mib2
Mindbomb E3 ubiquitin protein ligase 2.
  
0.519
ENSEEEP00000040089
Erythrocyte membrane protein band 4.1 like 5.
    
 
 0.506
Your Current Organism:
Electrophorus electricus
NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.