STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113574763RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events. (382 aa)    
Predicted Functional Partners:
LOC113569250
RRM domain-containing protein.
  
 
 0.653
LOC113586987
RRM domain-containing protein.
  
 
0.567
LOC113580022
RRM domain-containing protein.
  
 
0.566
LOC113591470
RRM domain-containing protein.
  
 
0.540
RBPMS
RRM domain-containing protein.
   
 
 0.520
ENSEEEP00000030766
Uncharacterized protein.
  
 
 
 0.494
cirbp
RRM domain-containing protein.
  
 
 
 0.491
LOC113576183
RRM domain-containing protein.
  
 
 
 0.488
LOC113568271
Uncharacterized protein.
  
 
 0.479
LOC113579683
ELAV-like protein; Belongs to the RRM elav family.
  
 
 0.472
Your Current Organism:
Electrophorus electricus
NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish
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