STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srrdSRR1 domain-containing protein. (282 aa)    
Predicted Functional Partners:
hps4
Hermansky-Pudlak syndrome 4.
      
 0.581
rrp36
Uncharacterized protein.
   
    0.537
asphd1
Asp_Arg_Hydrox domain-containing protein.
      
 0.491
asphd2
Asp_Arg_Hydrox domain-containing protein.
      
 0.491
hps6
Uncharacterized protein.
      
 0.473
Your Current Organism:
Electrophorus electricus
NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.