ptcd2 protein (Electrophorus electricus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ptcd2

Uncharacterized protein. (391 aa)

Predicted Functional Partners:

sec63

0.679

mrpl58

0.587

mrpl11

0.578

mrpl16

0.548

mrpl3

0.546

mrpl40

0.546

mrpl9

0.545

mrpl13

0.544

mrpl18

0.543

mrpl46

0.537

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
mrpl11	mrpl13	ENSEEEP00000042341	ENSEEEP00000026901	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.	0.998
mrpl11	mrpl16	ENSEEEP00000042341	ENSEEEP00000027223	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.	0.996
mrpl11	mrpl18	ENSEEEP00000042341	ENSEEEP00000029995	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	Uncharacterized protein.	0.842
mrpl11	mrpl3	ENSEEEP00000042341	ENSEEEP00000002286	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.998
mrpl11	mrpl40	ENSEEEP00000042341	ENSEEEP00000031780	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	Uncharacterized protein.	0.934
mrpl11	mrpl46	ENSEEEP00000042341	ENSEEEP00000034448	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	MRP-L46 domain-containing protein.	0.987
mrpl11	mrpl58	ENSEEEP00000042341	ENSEEEP00000015202	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	Mitochondrial ribosomal protein L58.	0.918
mrpl11	mrpl9	ENSEEEP00000042341	ENSEEEP00000050854	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	RIBOSOMAL_L9 domain-containing protein.	0.993
mrpl11	ptcd2	ENSEEEP00000042341	ENSEEEP00000029615	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	Uncharacterized protein.	0.578
mrpl13	mrpl11	ENSEEEP00000026901	ENSEEEP00000042341	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	0.998
mrpl13	mrpl16	ENSEEEP00000026901	ENSEEEP00000027223	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.	Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.	0.998
mrpl13	mrpl18	ENSEEEP00000026901	ENSEEEP00000029995	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.	Uncharacterized protein.	0.909
mrpl13	mrpl3	ENSEEEP00000026901	ENSEEEP00000002286	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.998
mrpl13	mrpl40	ENSEEEP00000026901	ENSEEEP00000031780	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.	Uncharacterized protein.	0.992
mrpl13	mrpl46	ENSEEEP00000026901	ENSEEEP00000034448	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.	MRP-L46 domain-containing protein.	0.991
mrpl13	mrpl58	ENSEEEP00000026901	ENSEEEP00000015202	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.	Mitochondrial ribosomal protein L58.	0.926
mrpl13	mrpl9	ENSEEEP00000026901	ENSEEEP00000050854	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.	RIBOSOMAL_L9 domain-containing protein.	0.998
mrpl13	ptcd2	ENSEEEP00000026901	ENSEEEP00000029615	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.	Uncharacterized protein.	0.544
mrpl16	mrpl11	ENSEEEP00000027223	ENSEEEP00000042341	Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	0.996
mrpl16	mrpl13	ENSEEEP00000027223	ENSEEEP00000026901	Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.	0.998