STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
def8Phorbol-ester/DAG-type domain-containing protein. (436 aa)    
Predicted Functional Partners:
uvrag
UV radiation resistance associated gene.
    
 
 0.612
mthfsd
RRM domain-containing protein.
      
 0.581
pdcd5
Uncharacterized protein.
      
 0.569
znf276
Uncharacterized protein.
      
 0.545
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 
 0.533
inpp5d
Inositol polyphosphate-5-phosphatase D.
   
  
 0.518
becn1
Uncharacterized protein.
    
 
 0.505
LOC113582206
Uncharacterized protein.
      
 0.479
tcf25
Uncharacterized protein.
      
 0.472
DBNDD1
Uncharacterized protein.
      
 0.444
Your Current Organism:
Electrophorus electricus
NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.