Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC113569258 | cunh6orf136 | ENSEEEP00000006448 | ENSEEEP00000037831 | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Uncharacterized protein. | 0.452 |
LOC113569258 | gtf2h4 | ENSEEEP00000006448 | ENSEEEP00000017641 | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.900 |
LOC113569258 | tcf19 | ENSEEEP00000006448 | ENSEEEP00000047834 | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Transcription factor 19 (SC1), like. | 0.405 |
abcf1 | cunh6orf136 | ENSEEEP00000037803 | ENSEEEP00000037831 | Uncharacterized protein. | Uncharacterized protein. | 0.493 |
abcf1 | gnl1 | ENSEEEP00000037803 | ENSEEEP00000025407 | Uncharacterized protein. | CP-type G domain-containing protein. | 0.602 |
abcf1 | tcf19 | ENSEEEP00000037803 | ENSEEEP00000047834 | Uncharacterized protein. | Transcription factor 19 (SC1), like. | 0.600 |
cunh6orf136 | LOC113569258 | ENSEEEP00000037831 | ENSEEEP00000006448 | Uncharacterized protein. | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.452 |
cunh6orf136 | abcf1 | ENSEEEP00000037831 | ENSEEEP00000037803 | Uncharacterized protein. | Uncharacterized protein. | 0.493 |
cunh6orf136 | gnl1 | ENSEEEP00000037831 | ENSEEEP00000025407 | Uncharacterized protein. | CP-type G domain-containing protein. | 0.572 |
cunh6orf136 | gtf2h4 | ENSEEEP00000037831 | ENSEEEP00000017641 | Uncharacterized protein. | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.452 |
cunh6orf136 | nrm | ENSEEEP00000037831 | ENSEEEP00000006935 | Uncharacterized protein. | Uncharacterized protein. | 0.552 |
cunh6orf136 | tcf19 | ENSEEEP00000037831 | ENSEEEP00000047834 | Uncharacterized protein. | Transcription factor 19 (SC1), like. | 0.578 |
gnl1 | abcf1 | ENSEEEP00000025407 | ENSEEEP00000037803 | CP-type G domain-containing protein. | Uncharacterized protein. | 0.602 |
gnl1 | cunh6orf136 | ENSEEEP00000025407 | ENSEEEP00000037831 | CP-type G domain-containing protein. | Uncharacterized protein. | 0.572 |
gnl1 | nrm | ENSEEEP00000025407 | ENSEEEP00000006935 | CP-type G domain-containing protein. | Uncharacterized protein. | 0.485 |
gnl1 | tcf19 | ENSEEEP00000025407 | ENSEEEP00000047834 | CP-type G domain-containing protein. | Transcription factor 19 (SC1), like. | 0.578 |
gtf2h4 | LOC113569258 | ENSEEEP00000017641 | ENSEEEP00000006448 | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.900 |
gtf2h4 | cunh6orf136 | ENSEEEP00000017641 | ENSEEEP00000037831 | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Uncharacterized protein. | 0.452 |
gtf2h4 | tcf19 | ENSEEEP00000017641 | ENSEEEP00000047834 | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Transcription factor 19 (SC1), like. | 0.405 |
nrm | cunh6orf136 | ENSEEEP00000006935 | ENSEEEP00000037831 | Uncharacterized protein. | Uncharacterized protein. | 0.552 |
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