STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rcl1Uncharacterized protein. (373 aa)    
Predicted Functional Partners:
bms1
Bms1-type G domain-containing protein.
   
 0.999
utp4
WD_REPEATS_REGION domain-containing protein.
   
 0.998
bysl
Uncharacterized protein.
   
 
 0.998
heatr1
HEAT repeat containing 1.
   
 0.997
LOC113590732
Uncharacterized protein.
   
 
 0.997
wdr43
WD_REPEATS_REGION domain-containing protein.
   
 0.997
rrp9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
   
 
 0.996
wdr36
WD_REPEATS_REGION domain-containing protein.
   
 
 0.996
noc4l
Nucleolar complex associated 4 homolog.
   
 
 0.996
UTP18
WD_REPEATS_REGION domain-containing protein.
   
 0.996
Your Current Organism:
Electrophorus electricus
NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.