STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stx18Syntaxin-18_N domain-containing protein. (320 aa)    
Predicted Functional Partners:
zw10
Zw10 kinetochore protein.
    
 0.997
use1
Uncharacterized protein.
   
 0.996
rint1
RAD50 interactor 1.
    
 0.984
nbas
Neuroblastoma amplified sequence.
    
 0.983
snx15
Sorting nexin 15.
    
 0.973
ENSEEEP00000008414
Ribosomal protein S6 kinase polypeptide 1.
    
 0.973
ENSEEEP00000026635
BCL2 interacting protein 1a.
   
 0.960
scfd1
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.955
ENSEEEP00000020982
SEC22 homolog B, vesicle trafficking protein a.
   
 0.929
sec22b
Uncharacterized protein; Belongs to the synaptobrevin family.
   
 0.929
Your Current Organism:
Electrophorus electricus
NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.