STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
polr1dUncharacterized protein. (170 aa)    
Predicted Functional Partners:
pold2
Uncharacterized protein.
    
 0.622
LOC113586243
Survival of motor neuron 1, telomeric.
   
 0.612
pold1
DNA polymerase.
   
 0.597
mus81
MUS81 structure-specific endonuclease subunit.
    
 0.589
ENSEEEP00000016716
Helicase ATP-binding domain-containing protein.
    
 0.560
ENSEEEP00000037634
ERCC4 domain-containing protein.
    
 0.560
ENSEEEP00000037636
Helicase C-terminal domain-containing protein.
    
 0.560
snrpe
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.554
ddx20
Uncharacterized protein.
   
 0.546
snrpd2
Small nuclear ribonucleoprotein Sm D2.
    
 0.530
Your Current Organism:
Electrophorus electricus
NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.