STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEEEP00000050153Si:cabz01007807.1. (295 aa)    
Predicted Functional Partners:
ENSEEEP00000016716
Helicase ATP-binding domain-containing protein.
    
 0.727
ENSEEEP00000037634
ERCC4 domain-containing protein.
    
 0.727
ENSEEEP00000037636
Helicase C-terminal domain-containing protein.
    
 0.727
lin52
Lin-52 DREAM MuvB core complex component.
    
 0.517
Cenpt
CENP-T_C domain-containing protein.
    
 0.509
lin54
CRC domain-containing protein.
    
 0.505
lin9
DIRP domain-containing protein.
    
 0.496
rpa1
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
    
 0.466
LOC113575401
WD_REPEATS_REGION domain-containing protein.
    
 0.426
rbbp4
WD_REPEATS_REGION domain-containing protein.
    
 0.426
Your Current Organism:
Electrophorus electricus
NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.