Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSELUP00000030223 | ENSELUP00000038179 | ENSELUP00000030223 | ENSELUP00000038179 | Uncharacterized protein. | Intersectin 2b. | 0.945 |
ENSELUP00000030223 | LOC105011942 | ENSELUP00000030223 | ENSELUP00000000357 | Uncharacterized protein. | Wu:fi04e12. | 0.515 |
ENSELUP00000030223 | sptan1 | ENSELUP00000030223 | ENSELUP00000040558 | Uncharacterized protein. | Spectrin alpha, non-erythrocytic 1. | 0.924 |
ENSELUP00000038179 | ENSELUP00000030223 | ENSELUP00000038179 | ENSELUP00000030223 | Intersectin 2b. | Uncharacterized protein. | 0.945 |
ENSELUP00000038179 | LOC105011942 | ENSELUP00000038179 | ENSELUP00000000357 | Intersectin 2b. | Wu:fi04e12. | 0.515 |
ENSELUP00000038179 | sptan1 | ENSELUP00000038179 | ENSELUP00000040558 | Intersectin 2b. | Spectrin alpha, non-erythrocytic 1. | 0.924 |
LOC105011879 | LOC105011942 | ENSELUP00000000645 | ENSELUP00000000357 | Desmocollin 2 like; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Wu:fi04e12. | 0.524 |
LOC105011879 | LOC105013272 | ENSELUP00000000645 | ENSELUP00000036075 | Desmocollin 2 like; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Junction plakoglobin b. | 0.765 |
LOC105011879 | LOC105021477 | ENSELUP00000000645 | ENSELUP00000009358 | Desmocollin 2 like; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Junction plakoglobin a. | 0.765 |
LOC105011879 | ctnnb1 | ENSELUP00000000645 | ENSELUP00000003521 | Desmocollin 2 like; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Catenin (cadherin-associated protein), beta 1. | 0.694 |
LOC105011942 | ENSELUP00000030223 | ENSELUP00000000357 | ENSELUP00000030223 | Wu:fi04e12. | Uncharacterized protein. | 0.515 |
LOC105011942 | ENSELUP00000038179 | ENSELUP00000000357 | ENSELUP00000038179 | Wu:fi04e12. | Intersectin 2b. | 0.515 |
LOC105011942 | LOC105011879 | ENSELUP00000000357 | ENSELUP00000000645 | Wu:fi04e12. | Desmocollin 2 like; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | 0.524 |
LOC105011942 | LOC105013272 | ENSELUP00000000357 | ENSELUP00000036075 | Wu:fi04e12. | Junction plakoglobin b. | 0.584 |
LOC105011942 | LOC105018752 | ENSELUP00000000357 | ENSELUP00000019031 | Wu:fi04e12. | Uncharacterized protein; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | 0.524 |
LOC105011942 | LOC105021477 | ENSELUP00000000357 | ENSELUP00000009358 | Wu:fi04e12. | Junction plakoglobin a. | 0.584 |
LOC105011942 | ctnnb1 | ENSELUP00000000357 | ENSELUP00000003521 | Wu:fi04e12. | Catenin (cadherin-associated protein), beta 1. | 0.519 |
LOC105011942 | itgb4 | ENSELUP00000000357 | ENSELUP00000041677 | Wu:fi04e12. | Integrin beta. | 0.712 |
LOC105011942 | kazn | ENSELUP00000000357 | ENSELUP00000024436 | Wu:fi04e12. | Kazrin, periplakin interacting protein b. | 0.499 |
LOC105011942 | sptan1 | ENSELUP00000000357 | ENSELUP00000040558 | Wu:fi04e12. | Spectrin alpha, non-erythrocytic 1. | 0.529 |
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