STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pibf1Progesterone immunomodulatory binding factor 1. (737 aa)    
Predicted Functional Partners:
bora
Bora aurora kinase A activator.
   
 0.655
wdr90
WD repeat domain 90.
   
 0.623
fopnl
LisH domain-containing protein.
   
 
 0.621
mzt1
Mitotic spindle organizing protein 1.
    
 
 0.619
txndc12
Thioredoxin domain containing 12 (endoplasmic reticulum).
    
 0.618
ccdc138
Uncharacterized protein.
   
 
 0.616
FAM92B
Family with sequence similarity 92 member B.
   
 0.612
ENSELUP00000024235
TBC1 domain family, member 31.
    
 
 0.600
madd
MAP-kinase activating death domain.
      
 0.587
ttll5
Tubulin tyrosine ligase-like family, member 5.
    
 
 0.585
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.