STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105031126TPR_REGION domain-containing protein. (2267 aa)    
Predicted Functional Partners:
ptges3l
CS domain-containing protein.
   
 0.766
ptges3
Prostaglandin E synthase 3b (cytosolic).
   
 0.758
LOC105023832
Prostaglandin E synthase 3a (cytosolic).
   
 0.758
LOC105029881
NME/NM23 family member 8; Belongs to the NDK family.
  
 0.738
ENSELUP00000016891
NDK domain-containing protein.
  
 0.738
Nme8
NDK domain-containing protein.
  
 0.738
chek2
Checkpoint kinase 2.
   
 
 0.707
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.705
wdhd1
WD repeat and HMG-box DNA binding protein 1.
    
 
 0.703
LOC105027820
TSC complex subunit 1a.
   
 0.702
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.