STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105016909Carbonic anhydrase XVI b. (1413 aa)    
Predicted Functional Partners:
cntn2
Contactin 2.
    
 0.684
ENSELUP00000001629
Contactin 4.
    
 0.645
LOC105005898
Contactin 3b.
    
 0.645
LOC105024871
Contactin 1b.
    
 0.645
CNTN1
Contactin 1.
    
 0.645
LOC105017382
Uncharacterized protein.
    
 0.645
ENSELUP00000042662
Contactin 5.
    
 0.645
nfasc
Neurofascin homolog (chicken) a.
    
 0.624
chl1
Cell adhesion molecule L1-like b.
    
 0.624
ENSELUP00000008926
L1 cell adhesion molecule, paralog a.
    
 0.624
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.