STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lg07h11orf1Expressed sequence EH456644. (188 aa)    
Predicted Functional Partners:
lg17h1orf158
Si:ch211-226m7.4.
   
   0.665
efhb
EF-hand domain family, member B.
   
   0.665
tekt3
Tektin 3.
   
   0.665
cfap77
Cilia and flagella associated protein 77.
   
   0.626
Lg10h5orf49
Si:dkeyp-46h3.1.
   
   0.626
tekt2
Tektin 2 (testicular).
   
   0.626
ENSELUP00000038349
Cilia and flagella associated protein 45.
   
   0.624
mns1
Meiosis-specific nuclear structural 1.
   
   0.618
ccdc173
Coiled-coil domain containing 173.
   
   0.616
cfap52
Cilia and flagella associated protein 52.
   
   0.616
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.