STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmc1COX assembly mitochondrial protein. (107 aa)    
Predicted Functional Partners:
azi2
5-azacytidine induced 2.
      
 0.669
LOC105016429
Cytochrome c oxidase copper chaperone COX17.
   
  
 0.644
LOC105016589
Cytochrome C oxidase assembly factor 5.
   
  
 0.624
atp23
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
      
 0.585
ccdc12
Coiled-coil domain containing 12.
      
 0.584
timm10
Translocase of inner mitochondrial membrane 10 homolog (yeast).
   
  
 0.533
LOC105021186
Cytochrome C oxidase assembly factor 3a.
   
 
 0.531
ndufb7
NADH:ubiquinone oxidoreductase subunit B7.
      
 0.531
pfdn6
Uncharacterized protein.
   
  
 0.476
LOC105013414
Cytochrome C oxidase assembly factor 3b.
   
 
 0.469
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.