STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105011397Fras1 related extracellular matrix 1b. (2095 aa)    
Predicted Functional Partners:
itga8
Integrin, alpha 8; Belongs to the integrin alpha chain family.
   
 
 0.906
LOC105019428
Integrin beta; Belongs to the integrin beta chain family.
    
  0.902
LOC105017753
Integrin beta; Belongs to the integrin beta chain family.
    
  0.902
igfbp7
Insulin-like growth factor binding protein 7.
      
 0.676
hus1
Checkpoint protein; Belongs to the HUS1 family.
      
 0.581
ENSELUP00000000274
Ankyrin repeat and sterile alpha motif domain containing 1B.
   
  0.571
ENSELUP00000014335
CASK interacting protein 1.
   
  0.571
ANKS1A
Ankyrin repeat and sterile alpha motif domain containing 1A.
   
  0.571
LOC105028379
Ankyrin repeat and sterile alpha motif domain containing 1Ab.
   
  0.571
ENSELUP00000037168
Uncharacterized protein.
   
  0.571
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.