STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105011399RAB3B, member RAS oncogene family. (219 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.916
LOC105024643
CHM Rab escort protein.
    
 0.630
LOC105023750
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.629
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.629
SLC18A3
Solute carrier family 18 member A3.
   
 
 0.624
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.601
LOC105015953
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.601
LOC105030656
Synaptotagmin Vb.
   
 0.595
LOC105027256
Uncharacterized protein.
   
 0.595
syt1
Synaptotagmin Ia.
   
 0.595
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.