STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubac1UBA domain containing 1. (424 aa)    
Predicted Functional Partners:
Rnf123
Ring finger protein 123.
   
 
 0.935
ubl7
Ubiquitin-like 7b (bone marrow stromal cell-derived).
    
 0.610
rps27a
Ribosomal protein S27a.
    
 0.581
zfand4
Zinc finger, AN1-type domain 4.
    
 0.531
pmpca
Peptidase (mitochondrial processing) alpha; Belongs to the peptidase M16 family.
   
  
 0.529
h6pd
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
      
 0.527
nexn
Nexilin (F actin binding protein).
      
 0.509
nub1
Negative regulator of ubiquitin-like proteins 1.
      
 0.507
camsap1
Calmodulin regulated spectrin-associated protein 1b.
 
    
 0.492
ENSELUP00000002075
Uncharacterized protein.
      
 0.461
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.